| # | Title | Artist | Length |
|---|
| 1 | Route 119 | Go Ichinose | 1:48 |
| 2 | Fortree City | Morikazu Aoki | 0:55 |
| 3 | Route 120 | Morikazu Aoki | 1:32 |
| 4 | Interviewers | Go Ichinose | 0:28 |
| 5 | Safari Zone | Go Ichinose | 0:52 |
| 6 | Trainers' Eyes Meet (Gentleman) | Go Ichinose | 0:42 |
| 7 | Lilycove City | Go Ichinose | 1:27 |
| 8 | Museum | Morikazu Aoki | 2:09 |
| 9 | Move Deleted | Morikazu Aoki | 0:04 |
| 10 | Brendan | Go Ichinose | 0:53 |
| 11 | Battle! (Brendan/May) | Junichi Masuda | 1:44 |
| 12 | Evolution | Junichi Masuda & Morikazu Aoki | 0:33 |
| 13 | Congratulations! Your Pokémon Evolved! | Junichi Masuda & Morikazu Aoki | 0:05 |
| 14 | Poké Mart | Go Ichinose | 1:16 |
| 15 | Mt. Pyre | Junichi Masuda & Go Ichinose | 1:38 |
| 16 | Trainers' Eyes Meet (Psychic) | Go Ichinose | 0:30 |
| 17 | Trainers' Eyes Meet (Hex Maniac) | Go Ichinose | 0:50 |
| 18 | Mt. Pyre Exterior | Go Ichinose | 1:49 |
| 19 | Hideout | Go Ichinose | 1:04 |
| 20 | Obtained an Item! | Junichi Masuda & Morikazu Aoki | 0:04 |
| 21 | Team Aqua Appears! | Go Ichinose | 0:50 |
| 22 | Battle! (Team Aqua/Team Magma Leaders) | Junichi Masuda | 2:12 |
| 23 | The Super-Ancient Pokémon Awaken! | Morikazu Aoki | 0:13 |
| 24 | Drought | Go Ichinose | 1:05 |
| 25 | Heavy Rain | Go Ichinose | 0:55 |
| 26 | Dive | Go Ichinose | 1:55 |
| 54 | Sootopolis City | Go Ichinose | 1:32 |
| 28 | Cave of Origin | Morikazu Aoki | 1:18 |
| 29 | Battle! (Super-Ancient Pokémon) | Junichi Masuda | 1:29 |
| 30 | Trainers' Eyes Meet (Swimmer♀) | Morikazu Aoki | 0:31 |
| 31 | Ever Grande City | Go Ichinose | 1:34 |
| 32 | Obtained a Berry! | Morikazu Aoki | 0:04 |
| 33 | Contest Lobby | Go Ichinose | 0:55 |
| 34 | Pokémon Contest! | Go Ichinose | 1:08 |
| 35 | Results Announcement | Go Ichinose | 0:37 |
| 36 | Contest Winner | Go Ichinose | 0:32 |
| 37 | Sealed Chamber | Go Ichinose | 1:04 |
| 38 | Battle! (Regirock/Regice/Registeel) | Junichi Masuda | 1:28 |
| 39 | The Trick House | Go Ichinose | 1:10 |
| 40 | Abandoned Ship | Morikazu Aoki | 1:11 |
| 41 | Battle Tower | Morikazu Aoki | 1:10 |
| 42 | Victory Road | Go Ichinose | 1:21 |
| 43 | Trainers' Eyes Meet (Cooltrainer) | Go Ichinose | 0:49 |
| 44 | The Elite Four Appear! | Go Ichinose | 0:47 |
| 45 | Battle! (Elite Four) | Junichi Masuda | 1:47 |
| 46 | Champion Steven | Go Ichinose | 0:51 |
| 47 | Battle! (Steven) | Junichi Masuda | 1:51 |
| 48 | Victory! (Steven) | Morikazu Aoki | 0:53 |
| 49 | Room of Glory | Go Ichinose | 0:59 |
| 50 | The Hall of Fame | Junichi Masuda & Go Ichinose | 1:09 |
| 51 | Ending Theme | Go Ichinose | 2:56 |
| 52 | The End | Go Ichinose | 2:23 |
| 53 | Trick Master | Hitomi Sato, Go Ichinose, Karakuri King & Karakuri Chrous | 2:23 |
| 54 | Slateport City | Kenji Matsushima, Go Ichinose & Hiroko Tanako | 3:31 |
| 55 | Steven Stone | Junichi Masuda | 3:16 |
