| 1977 | Complete Wind Music | Jacques Martin Hotteterre; Brüggen, B. & W. Kuijken, Haynes, Leonhardt | 1 |
| 1978 | Virtuose Kammermusik | Frans Brüggen | 1 |
| 1980 | Die Brandenburgische Konzerte | J. S. Bach; Brüggen, Kuijken, Bylsma, Leonhardt | 4 |
| 1981 | Oboenkonzerte | Vivaldi, Marcello, Platti; Bruce Haynes, Baroque Orchestra, Frans Brüggen | 3 |
| 1986 | Concerti per Flauto, Archi e Cembalo, op. 10 | Antonio Vivaldi; Orchestra of the Eighteenth Century, Frans Brüggen | 2 |
| 1986 | Early Italian Madrigals | Capella Antiqua, Konrad Ruhland, Frans Brüggen, Gustav Leonhardt | 1 |
| 1986 | Piano Concertos, KV 466 & 491 | Wolfgang Amadeus Mozart; Orchestra of the 18th Century, Frans Brüggen, John Gibbons | 1 |
| 1986 | Symphonies no. 31 “Paris” / no. 35 “Haffner” | Mozart; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1986 | Works for Trumpet | Georg Philipp Telemann, Giuseppe Torelli; Maurice André, Concerto Amsterdam, Frans Brüggen | 1 |
| 1987 | Le quattro stagioni / Three Flute Concertos | Vivaldi; La Petite Bande, Frans Brüggen | 1 |
| 1987 | Les Boréades / Dardanus (Suites) | Jean-Philippe Rameau; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1987 | Symphony no. 41 «Jupiter» / Overture «La clemenza di Tito» | Mozart; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1988 | Brandenburg Concertos nos. 1-3 / Flute Sonata no. 1 | J. S. Bach; Frans Brüggen, Gustav Leonhardt | 2 |
| 1988 | Brandenburg Concertos nos. 4-6 / Flute Sonata no. 3 | J. S. Bach; Frans Brüggen, Gustav Leonhardt | 2 |
| 1988 | Clarinet Concerto / Clarinet Quintet | Mozart; Eric Hoeprich, Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1988 | Symphonies nos. 101 & 103 | Joseph Haydn; Orchestra of the 18th Century, Frans Brüggen | 2 |
| 1988 | Symphony no. 3 "Eroica" | Beethoven; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1989 | Serenade in B-flat, K. 361 “Gran Partita” | Mozart; Orchestra of the 18th Century, Frans Brüggen | 2 |
| 1989 | Complete Sonatas & Partita for Transvers Flute & Alternative Instrumentations | J.S. Bach; Frans Brüggen, Gustav Leonhardt, Anner Bylsma | 3 |
| 1989 | Symphonies Nos. 86 & 88 | Haydn; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1990 | Symphonies nos. 7 & 8 | Beethoven; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1990 | Mass in B minor | Bach; Frans Brüggen, Netherlands Chamber Choir, Orchestra of the 18th Century | 1 |
| 1990 | Mozart: Symphony No. 40 / Beethoven: Symphony No. 1 | Mozart, Beethoven; Frans Brüggen, Orchestra of the Eighteenth Century | 1 |
| 1990 | Rameau: Castor et Pollux / Purcell: 3 Fantasias | Henry Purcell, Jean-Philippe Rameau; Frans Brüggen, Orchestra of the Eighteenth Century | 1 |
| 1990 | Symphony no. 38 «Prague» / Overture «Le nozze di Figaro» | Wolfgang Amadeus Mozart; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1991 | Symphonies Nos. 4 & 6 «Pastoral» | Ludwig van Beethoven; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1991 | Vesperae solemnes de confessore, K. 339 / Symphony no. 40 in G minor, K. 550 | Mozart; Netherlands Chamber Choir, Orchestra of the 18th Century, Frans Brüggen | 2 |
| 1992 | Melodie / Symfonie voor losse snaren | Louis Andriessen; Frans Brüggen, Louis Andriessen, Caecilia Consort | 1 |
| 1992 | Symphonies No. 1 in C minor Op. 11 / No. 4 in A major Op. 90 | Felix Mendelssohn; Radio Kamerorkest, Frans Brüggen | 2 |
| 1992 | Symphonies Nos. 100 "Military" & 104 "London" | Haydn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1993 | Pieces de clavecin en concerts | Jean‐Philippe Rameau; Frans Brüggen, Gustav Leonhardt, Wieland Kuijken, Sigiswald Kuijken | 1 |
| 1993 | St. John Passion | Johann Sebastian Bach; Orchestra of the Eighteenth Century, Annegeer Stumphius, James Bowman, Van der Meel, Christoph Prégardien, Kristinn Sigmundsson, Peter Kooij, Netherlands Chamber Choir, Frans Brüggen | 1 |
| 1994 | Symphonies 97 & 98 | Haydn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1994 | Musique de Table | Georg Philipp Telemann; Concerto Amsterdam, Frans Brüggen | 2 |
| 1994 | Coronation Mass / Vesperae solennes de confessore / Ave verum corpus | Mozart; Netherlands Chamber Choir, Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1994 | Das Alte Werk - Highlights - Extraits | Harnoncourt, Il giardino armonico, Leonhardt, Brüggen, Chanticleer, Tachezi, Tragicomedia, van Asperen, St. James’s Baroque Players, Bylsma, Schröder … | 1 |
| 1995 | Die Geschöpfe des Prometheus | Beethoven; Orchestra Of The 18th Century, Frans Brüggen | 1 |
| 1995 | Die Schöpfung (The Creation) | Joseph Haydn; Frans Brüggen, Orchestra of the Eighteenth Century, Eike Wilm Schulte, Coro Gulbenkian, John Mark Ainsley, Ľuba Orgonášová, Joan Rodgers | 2 |
| 1995 | Frans Brüggen Edition, vol. 8: Vivaldi Chamber Concertos | Antonio Vivaldi; Frans Brüggen | 1 |
| 1995 | Italian Recorder Sonatas - Frans Brüggen Edition Vol.2 | Frans Brüggen, Anner Bylsma, Gustav Leonhardt | 1 |
| 1995 | The Art of the Recorder | Frans Brüggen | 1 |
| 1996 | Mozart for 2 & 4 Orchestras: Symphonies nos. 34, 40 / Notturno for 4 Orchestras | Mozart; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1996 | Complete Works for Flute and Orchestra / Concerto for Flute and Harp | Mozart; Konrad Hünteler, Helga Storck, Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1996 | Symphonies nos. 2, 3 & 5 | Franz Schubert; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 1997 | 12 Sonate Metodiche | Georg Philipp Telemann; Frans Brüggen, Han de Vries, Anner Bylsma, Gustav Leonhardt, The Boston Museum Trio | 1 |
| 1997 | Symphonies Nos. 3, 4 & 5 | Mendelssohn; Orchestra of the Eighteenth Century, Frans Brüggen | 2 |
| 1998 | Cantates BWV56 & BWV82 | Johann Sebastian Bach; Max van Egmond, Frans Brüggen | 1 |
| 1998 | Kantaten "Kreutzstab" (BWV 56) & "Ich Habe Genug" (BWV 82) | J.S. Bach; Max van Egmond, Baroque Orchestra, Frans Brüggen | 1 |
| 1998 | Violin Concertos & Concertante Movements | Wolfgang Amadeus Mozart; Jaap Schröder, Frans Brüggen, Mozart-Ensemble Amsterdam | 1 |
| 1999 | The "Paris" Symphonies Nos. 82 - 87 | Joseph Haydn; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 1999 | Op. 5, nos. 7-11 / No. 12, “La Follia” | Corelli; Brüggen, Bylsma, Leonhardt | 1 |
| 1999 | Trio Sonatas for Flute | Georg Philipp Telemann; Frans Brüggen, Sigiswald Kuijken, Bob van Asperen, Anner Bylsma, Gustav Leonhardt | 1 |
| 2000 | Symphonies 88 & 89 / Sinfonia concertante | Haydn; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 2001 | The “London” Symphonies, Volume 1 | Haydn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2001 | The "London" Symphonies, Volume 2 | Haydn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2003 | Recorder Sonatas and Fantasias | Telemann; Frans Brüggen, Anner Bylsma, Gustav Leonhardt | 3 |
| 2006 | Arias de concierto | Mozart; Cyndia Sieden, Orquesta Del Siglo XVIII, Frans Brüggen | 1 |
| 2008 | Violin Concertos nos. 1-5 / Sinfonia Concertante, K. 364 | Mozart; Thomas Zehetmair, Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2008 | Works for Piano and Orchestra | Fryderyk Chopin; Nelson Goerner, Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2008 | Beethoven: Symphony no. 1 / Keuris: Symphony in D | Ludwig van Beethoven, Tristan Keuris; Netherlands Radio Chamber Orchestra, Frans Brüggen, Jaap van Zweden | 1 |
| 2008 | Matthäus Passion / Johannes Passion / Hohe Messe | Bach; Frans Brüggen, Netherlands Chamber Choir, Orchestra of the 18th Century | 1 |
| 2008 | Orchestral Suites | Jean-Philippe Rameau; Orchestra of the Eighteenth Century, Frans Brüggen | 2 |
| 2009 | Symphonien Nr.3 "Schottische" & Nr.4 "Italienische" | Felix Mendelssohn Bartholdy; Orchestra of the 18th Century, Frans Brüggen | 1 |
| 2009 | The Seven Last Words Of Christ On The Cross | Joseph Haydn, Ron Ford, Frans Brüggen, Orchestra Of The Eighteenth Century | 1 |
| 2010 | Mass In B Minor, BWV 232 | Johann Sebastian Bach, Cappella Amsterdam, Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2010 | Orchestral Suites From Naïs & Zoroastre | Jean‐Philippe Rameau; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2011 | Les Indes Galantes / Castor et Pollux: Suiten | Jean-Philippe Rameau; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2011 | St John Passion, BWV 245 | Bach; Frans Brüggen & Orchestra Of The 18th Century | 1 |
| 2011 | Matthäus Passion, BWV 244 | Johann Sebastian Bach; Nico van der Meel, Kristinn Sigmundsson, Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2011 | The Wind Instruments Sonatas (Sonatas For Recorder & Transverse Flute) | Frans Brüggen, George Frideric Handel, Bob van Asperen, Anner Bylsma | 1 |
| 2012 | Easter Oratorio | Johann Sebastian Bach; Frans Brüggen & Orchestra Of The 18th Century | 1 |
| 2012 | Complete Flute Concertos | Mozart; Frans Vester, Edward Witsenburg, Mozart-Ensemble Amsterdam, Frans Brüggen | 1 |
| 2013 | Symphonies: No 3, "Scottish" - Symphony No 4, "Italian" | Felix Mendelssohn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2014 | The Last Three Symphonies | Wolfgang Amadeus Mozart; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| 2018 | Sonatas, Partitas & Suites: Complete Arrangements for Solo Recorder | J.S. Bach, Frans Brüggen; Bolette Roed | 1 |
| 2019 | Haydn: The London Symphonies | Frans Brüggen | 1 |
| 2024 | Tales of song and sadness | Frans Brüggen, Louis Andriessen; Cappella Amsterdam, Daniel Reuss, Orchestra of the Eighteenth Century | 1 |
| — | A Midsummer Night's Dream | Felix Mendelssohn, Frans Brüggen, Orchestra of the Eighteenth Century, Orquestra Gulbenkian | 1 |
| — | Requiem | Wolfgang Amadeus Mozart; Netherlands Chamber Choir, Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
| — | Symphonies 90, 91, 92 "Oxford" | Joseph Haydn; Orchestra of the Eighteenth Century, Frans Brüggen | 1 |
